Upgrade to 4.4.50-rt62

The current kernel is based on rt kernel v4.4.6-rt14. We will upgrade it
to 4.4.50-rt62.
The command to achieve it is:
a) Clone a git repo from
git://git.kernel.org/pub/scm/linux/kernel/git/rt/linux-stable-rt.git

b) Get the diff between this two changesets:
git diff 640eca2901f3435e616157b11379d3223a44b391
705619beeea1b0b48219a683fd1a901a86fdaf5e

where the two commits are:
[yjiang5@jnakajim-build linux-stable-rt]$ git show --oneline --name-only
640eca2901f3435e616157b11379d3223a44b391
640eca2901f3 v4.4.6-rt14
localversion-rt
[yjiang5@jnakajim-build linux-stable-rt]$ git show --oneline --name-only
705619beeea1b0b48219a683fd1a901a86fdaf5e
705619beeea1 Linux 4.4.50-rt62
localversion-rt

c) One patch has been backported thus revert the patch before applying.

 filterdiff -p1 -x scripts/package/Makefile
~/tmp/v4.4.6-rt14-4.4.50-rt62.diff  |patch -p1 --dry-run

Upstream status: backport

Change-Id: I244d57a32f6066e5a5b9915f9fbf99e7bbca6e01
Signed-off-by: Yunhong Jiang <yunhong.jiang@linux.intel.com>

3 files changed, 15 insertions, 7 deletions

diff --git a/kernel/fs/jbd2/commit.c b/kernel/fs/jbd2/commit.c
index 36345fefa..2d964ce45 100644
--- a/kernel/fs/jbd2/commit.c
+++ b/kernel/fs/jbd2/commit.c
@@ -124,7 +124,7 @@ static int journal_submit_commit_record(journal_t *journal,
 	struct commit_header *tmp;
 	struct buffer_head *bh;
 	int ret;
-	struct timespec now = current_kernel_time();
+	struct timespec64 now = current_kernel_time64();
 
 	*cbh = NULL;
 
diff --git a/kernel/fs/jbd2/journal.c b/kernel/fs/jbd2/journal.c
index 81e622681..624a57a9c 100644
--- a/kernel/fs/jbd2/journal.c
+++ b/kernel/fs/jbd2/journal.c
@@ -1408,11 +1408,12 @@ out:
 /**
  * jbd2_mark_journal_empty() - Mark on disk journal as empty.
  * @journal: The journal to update.
+ * @write_op: With which operation should we write the journal sb
  *
  * Update a journal's dynamic superblock fields to show that journal is empty.
  * Write updated superblock to disk waiting for IO to complete.
  */
-static void jbd2_mark_journal_empty(journal_t *journal)
+static void jbd2_mark_journal_empty(journal_t *journal, int write_op)
 {
 	journal_superblock_t *sb = journal->j_superblock;
 
@@ -1430,7 +1431,7 @@ static void jbd2_mark_journal_empty(journal_t *journal)
 	sb->s_start    = cpu_to_be32(0);
 	read_unlock(&journal->j_state_lock);
 
-	jbd2_write_superblock(journal, WRITE_FUA);
+	jbd2_write_superblock(journal, write_op);
 
 	/* Log is no longer empty */
 	write_lock(&journal->j_state_lock);
@@ -1716,7 +1717,13 @@ int jbd2_journal_destroy(journal_t *journal)
 	if (journal->j_sb_buffer) {
 		if (!is_journal_aborted(journal)) {
 			mutex_lock(&journal->j_checkpoint_mutex);
-			jbd2_mark_journal_empty(journal);
+
+			write_lock(&journal->j_state_lock);
+			journal->j_tail_sequence =
+				++journal->j_transaction_sequence;
+			write_unlock(&journal->j_state_lock);
+
+			jbd2_mark_journal_empty(journal, WRITE_FLUSH_FUA);
 			mutex_unlock(&journal->j_checkpoint_mutex);
 		} else
 			err = -EIO;
@@ -1975,7 +1982,7 @@ int jbd2_journal_flush(journal_t *journal)
 	 * the magic code for a fully-recovered superblock.  Any future
 	 * commits of data to the journal will restore the current
 	 * s_start value. */
-	jbd2_mark_journal_empty(journal);
+	jbd2_mark_journal_empty(journal, WRITE_FUA);
 	mutex_unlock(&journal->j_checkpoint_mutex);
 	write_lock(&journal->j_state_lock);
 	J_ASSERT(!journal->j_running_transaction);
@@ -2021,7 +2028,7 @@ int jbd2_journal_wipe(journal_t *journal, int write)
 	if (write) {
 		/* Lock to make assertions happy... */
 		mutex_lock(&journal->j_checkpoint_mutex);
-		jbd2_mark_journal_empty(journal);
+		jbd2_mark_journal_empty(journal, WRITE_FUA);
 		mutex_unlock(&journal->j_checkpoint_mutex);
 	}
 
diff --git a/kernel/fs/jbd2/transaction.c b/kernel/fs/jbd2/transaction.c
index ca181e81c..fa1b8e0dc 100644
--- a/kernel/fs/jbd2/transaction.c
+++ b/kernel/fs/jbd2/transaction.c
@@ -1156,6 +1156,7 @@ int jbd2_journal_get_create_access(handle_t *handle, struct buffer_head *bh)
 		JBUFFER_TRACE(jh, "file as BJ_Reserved");
 		spin_lock(&journal->j_list_lock);
 		__jbd2_journal_file_buffer(jh, transaction, BJ_Reserved);
+		spin_unlock(&journal->j_list_lock);
 	} else if (jh->b_transaction == journal->j_committing_transaction) {
 		/* first access by this transaction */
 		jh->b_modified = 0;
@@ -1163,8 +1164,8 @@ int jbd2_journal_get_create_access(handle_t *handle, struct buffer_head *bh)
 		JBUFFER_TRACE(jh, "set next transaction");
 		spin_lock(&journal->j_list_lock);
 		jh->b_next_transaction = transaction;
+		spin_unlock(&journal->j_list_lock);
 	}
-	spin_unlock(&journal->j_list_lock);
 	jbd_unlock_bh_state(bh);
 
 	/*