Upgrade to 4.4.50-rt62

The current kernel is based on rt kernel v4.4.6-rt14. We will upgrade it
to 4.4.50-rt62.
The command to achieve it is:
a) Clone a git repo from
git://git.kernel.org/pub/scm/linux/kernel/git/rt/linux-stable-rt.git

b) Get the diff between this two changesets:
git diff 640eca2901f3435e616157b11379d3223a44b391
705619beeea1b0b48219a683fd1a901a86fdaf5e

where the two commits are:
[yjiang5@jnakajim-build linux-stable-rt]$ git show --oneline --name-only
640eca2901f3435e616157b11379d3223a44b391
640eca2901f3 v4.4.6-rt14
localversion-rt
[yjiang5@jnakajim-build linux-stable-rt]$ git show --oneline --name-only
705619beeea1b0b48219a683fd1a901a86fdaf5e
705619beeea1 Linux 4.4.50-rt62
localversion-rt

c) One patch has been backported thus revert the patch before applying.

 filterdiff -p1 -x scripts/package/Makefile
~/tmp/v4.4.6-rt14-4.4.50-rt62.diff  |patch -p1 --dry-run

Upstream status: backport

Change-Id: I244d57a32f6066e5a5b9915f9fbf99e7bbca6e01
Signed-off-by: Yunhong Jiang <yunhong.jiang@linux.intel.com>

1 files changed, 48 insertions, 6 deletions

diff --git a/kernel/drivers/pci/probe.c b/kernel/drivers/pci/probe.c
index edb198420..71d9a6d1b 100644
--- a/kernel/drivers/pci/probe.c
+++ b/kernel/drivers/pci/probe.c
@@ -319,6 +319,9 @@ static void pci_read_bases(struct pci_dev *dev, unsigned int howmany, int rom)
 {
 	unsigned int pos, reg;
 
+	if (dev->non_compliant_bars)
+		return;
+
 	for (pos = 0; pos < howmany; pos++) {
 		struct resource *res = &dev->resource[pos];
 		reg = PCI_BASE_ADDRESS_0 + (pos << 2);
@@ -1016,6 +1019,7 @@ void set_pcie_port_type(struct pci_dev *pdev)
 	pos = pci_find_capability(pdev, PCI_CAP_ID_EXP);
 	if (!pos)
 		return;
+
 	pdev->pcie_cap = pos;
 	pci_read_config_word(pdev, pos + PCI_EXP_FLAGS, &reg16);
 	pdev->pcie_flags_reg = reg16;
@@ -1023,13 +1027,14 @@ void set_pcie_port_type(struct pci_dev *pdev)
 	pdev->pcie_mpss = reg16 & PCI_EXP_DEVCAP_PAYLOAD;
 
 	/*
-	 * A Root Port is always the upstream end of a Link.  No PCIe
-	 * component has two Links.  Two Links are connected by a Switch
-	 * that has a Port on each Link and internal logic to connect the
-	 * two Ports.
+	 * A Root Port or a PCI-to-PCIe bridge is always the upstream end
+	 * of a Link.  No PCIe component has two Links.  Two Links are
+	 * connected by a Switch that has a Port on each Link and internal
+	 * logic to connect the two Ports.
 	 */
 	type = pci_pcie_type(pdev);
-	if (type == PCI_EXP_TYPE_ROOT_PORT)
+	if (type == PCI_EXP_TYPE_ROOT_PORT ||
+	    type == PCI_EXP_TYPE_PCIE_BRIDGE)
 		pdev->has_secondary_link = 1;
 	else if (type == PCI_EXP_TYPE_UPSTREAM ||
 		 type == PCI_EXP_TYPE_DOWNSTREAM) {
@@ -1174,6 +1179,7 @@ void pci_msi_setup_pci_dev(struct pci_dev *dev)
 int pci_setup_device(struct pci_dev *dev)
 {
 	u32 class;
+	u16 cmd;
 	u8 hdr_type;
 	int pos = 0;
 	struct pci_bus_region region;
@@ -1219,6 +1225,16 @@ int pci_setup_device(struct pci_dev *dev)
 	/* device class may be changed after fixup */
 	class = dev->class >> 8;
 
+	if (dev->non_compliant_bars) {
+		pci_read_config_word(dev, PCI_COMMAND, &cmd);
+		if (cmd & (PCI_COMMAND_IO | PCI_COMMAND_MEMORY)) {
+			dev_info(&dev->dev, "device has non-compliant BARs; disabling IO/MEM decoding\n");
+			cmd &= ~PCI_COMMAND_IO;
+			cmd &= ~PCI_COMMAND_MEMORY;
+			pci_write_config_word(dev, PCI_COMMAND, cmd);
+		}
+	}
+
 	switch (dev->hdr_type) {		    /* header type */
 	case PCI_HEADER_TYPE_NORMAL:		    /* standard header */
 		if (class == PCI_CLASS_BRIDGE_PCI)
@@ -1401,6 +1417,21 @@ static void program_hpp_type1(struct pci_dev *dev, struct hpp_type1 *hpp)
 		dev_warn(&dev->dev, "PCI-X settings not supported\n");
 }
 
+static bool pcie_root_rcb_set(struct pci_dev *dev)
+{
+	struct pci_dev *rp = pcie_find_root_port(dev);
+	u16 lnkctl;
+
+	if (!rp)
+		return false;
+
+	pcie_capability_read_word(rp, PCI_EXP_LNKCTL, &lnkctl);
+	if (lnkctl & PCI_EXP_LNKCTL_RCB)
+		return true;
+
+	return false;
+}
+
 static void program_hpp_type2(struct pci_dev *dev, struct hpp_type2 *hpp)
 {
 	int pos;
@@ -1430,9 +1461,20 @@ static void program_hpp_type2(struct pci_dev *dev, struct hpp_type2 *hpp)
 			~hpp->pci_exp_devctl_and, hpp->pci_exp_devctl_or);
 
 	/* Initialize Link Control Register */
-	if (pcie_cap_has_lnkctl(dev))
+	if (pcie_cap_has_lnkctl(dev)) {
+
+		/*
+		 * If the Root Port supports Read Completion Boundary of
+		 * 128, set RCB to 128.  Otherwise, clear it.
+		 */
+		hpp->pci_exp_lnkctl_and |= PCI_EXP_LNKCTL_RCB;
+		hpp->pci_exp_lnkctl_or &= ~PCI_EXP_LNKCTL_RCB;
+		if (pcie_root_rcb_set(dev))
+			hpp->pci_exp_lnkctl_or |= PCI_EXP_LNKCTL_RCB;
+
 		pcie_capability_clear_and_set_word(dev, PCI_EXP_LNKCTL,
 			~hpp->pci_exp_lnkctl_and, hpp->pci_exp_lnkctl_or);
+	}
 
 	/* Find Advanced Error Reporting Enhanced Capability */
 	pos = pci_find_ext_capability(dev, PCI_EXT_CAP_ID_ERR);